Reference
Reference
Every help page in the package, generated from the package's own documentation, so it always matches the release.
On this page
Run an analysis
qdecr_fastlm- Vertex-wise linear regression
qdecrinternal- Run vertex-wise analyses
Inspect results
print.vw- Print for vw objects
summary.vw_fastlm- Summarize qdecr_fastlm clusters
hist.vw- Histograms of the vertex measures
stacks- Shows vw stacks
formula.vw_fastlm- Grabs the formula from qdecr_fastlm output
nobs.vw_fastlm- Grabs the number of included participants from qdecr_fastlm output
qdecr_fwhm- Grabs the estimated fwhm from qdecr_fastlm output
Plot
qdecr_snap- Opens Freeview to take snapshots
freeview- Opens Freeview
Save and load
qdecr_save- Saves "vw" objects from the QDECR package
qdecr_load- Loads files associated with QDECR projects
unload- Removes vertex-wise data from an "vw" object
reload- Reloads vertex-wise data for an "vw" object
MGH and annotation I/O
qdecr_read- qdecr_read function familyCovers
qdecr_read_ocn,qdecr_read_ocn_mask,qdecr_read_coef,qdecr_read_p,qdecr_read_t,qdecr_read_se load.mgh- Load an MGH file into memory
save.mgh- Save out an MGH file from memory
as_mgh- Create an object that is structured like an mgh object
load.annot- Load an .annot file into memory
Imputation helpers
imp2list- Convert imputation output to list
Low-level FBM helpers
qdecr_prep_mghinternal- Combine all MGH files into one object
bsfbm2mgh- Save out an MGH file from a big matrix
fbm_functions_from_qdecr- fbm functions from qdecrCovers
fbm_row_mean,fbm_col_mean,fbm_row_is_0,fbm_col_is_0,fbm_row_sum,fbm_col_sum,fbm_row_sd,fbm_col_sd